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PMD
[143 users on Ohloh]
PMD is a Java source code analyzer. It finds unused variables, empty catch blocks, unnecessary object creation, and more. It includes CPD, a tool to detect chunks of identical code.
Panopticode
[2 users on Ohloh]
The Panopticode project provides a standardized format for describing the structure of software projects and integrates metrics from several tools into that format. Reporting options provide correlation, historic analysis, and visualization.